Project in Biological Sequence Analysis

582676
2
Bioinformatiikka
Syventävät opinnot
Genome resequencing competition or similar project with the goal of learning practical high-throughput sequencing data analysis skills.
Vuosi Lukukausi Päivämäärä Periodi Kieli Vastuuhenkilö
2015 kevät 12.03-30.04. 4-4 Englanti Daniel Valenzuela

Luennot

Aika Huone Luennoija Päivämäärä
To 12-14 C220 Daniel Valenzuela 12.03.2015-30.04.2015

Yleistä

The goal of the course is that the students familiarize themselves with some bioinformatics tools and data formats frequently used in the field.
In the context of the  next-generation sequencing (NGS), the project consists in developing a variation calling pipeline,  which is nowadays a widely used method to obtain the genotype of a human organism.
The students are encouraged to work in groups of 2 -3 persons.
 

Kirjallisuus ja materiaali

The data for the project  can be Downloaded here.