Hannu Toivonen
Contact Information
Principal Investigator of
Examiner for exams
Teaching
2014 spring
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In charge
2013 autumn
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Lecturer , in charge
2013 spring
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Lecturer , in charge
2013 spring
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Lecturer , in charge
2012 autumn
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In charge
2012 spring
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Lecturer , in charge
2012 spring
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Lecturer , in charge
2011 autumn
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Lecturer , in charge
2011 autumn
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In charge
2011 autumn
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In charge
2011 spring
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Lecturer , in charge
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Instructor
2011 spring
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Lecturer , in charge
2010 spring
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Lecturer
2010 spring
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In charge
2009 autumn
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Lecturer
2009 spring
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Lecturer
2009 spring
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In charge
2008 autumn
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In charge
2008 spring
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In charge
2007 spring
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In charge
2005 autumn
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Assistant
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Lecturer , in charge
2005 spring
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In charge
2004 spring
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Lecturer , in charge
2003 autumn
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Lecturer
2003 autumn
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In charge
2003 spring
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Lecturer , in charge
2002 autumn
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Assistant
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Lecturer , in charge
Publications
2013
Contrasting Subgroup Discovery
Langohr, L. , PodpeÄan, V. , Petek, M. , MozetiÄ, I. , Gruden, K. , LavraÄ, N. & Toivonen, H. 2013 In : Computer Journal. 56, 3, p. 289-303. 15 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Effective Pruning for the Discovery of Conditional Functional Dependencies
Li, J. , Liu, J. , Toivonen, H. & Yong, J. 2013 In : Computer Journal. 56, 3, p. 378-392. 15 p.Publication: Contribution to journal ⺠A1 Refereed journal article
On Creative Uses of Word Associations
Toivonen, H. , Gross, O. , Toivanen, J. M. & Valitutti, A. 2013 p. 17-24. 8 p.Publication: Conference contribution ⺠B3 Unrefereed article in conference proceedings
2012
A Model for Mining Relevant and Non-redundant Information
Langohr, L. A. & Toivonen, H. 26.03.2012 p. 132-137.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Biomine: A network-structured resource of biological entities for link prediction
Eronen, L. , Hintsanen, P. & Toivonen, H. 2012 In: Bisociative Knowledge Discovery: An Introduction to Concept, Algorithms, Tools, and Applications. Berthold, M. R. (ed.). Springer-Verlag, p. 364–378. 15 p. (Lecture Notes in Computer Science).Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
Biomine: Predicting links between biological entities using network models of heterogeneous databases
Eronen, L. & Toivonen, H. 2012 In : BMC Bioinformatics. 13, 119, 42 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Corpus-Based Generation of Content and Form in Poetry
Toivanen, J. , Toivonen, H. , Valitutti, A. & Gross, O. 2012 p. 175-179. 5 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Decomposition and Distribution of Humorous Effect in Interactive Systems
Valitutti, A. , Toivonen, H. , Gross, O. & Toivanen, J. 2012 p. 96-100. 5 p.Publication: Conference contribution ⺠B3 Unrefereed article in conference proceedings
Discovery of Novel Term Associations in a Document Collection
Hynönen, T. , Mahler, S. J. & Toivonen, H. 2012 In: Bisociative Knowledge Discovery. Berthold, M. R. (ed.). Springer-Verlag, p. 91–103. 13 p. (Lecture Notes in Artificial Intelligence (LNAI); 7250).Publication: Contribution to book/anthology ⺠B2 Contribution to book/other compilations (non-refereed)
Finding representative nodes in probabilistic graphs
Langohr, L. A. & Toivonen, H. 2012 In: Bisociative Knowledge Discovery. Berthold, M. R. (ed.). Springer, p. 218–229. 12 p. (Lecture Notes in Artificial Intelligence (LNAI); 7250).Publication: Contribution to book/anthology ⺠B2 Contribution to book/other compilations (non-refereed)
Lexical Creativity from Word Associations
Gross, O. , Toivonen, H. , Toivanen, J. & Valitutti, A. 2012 p. 35-42. 8 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Network Analysis: Overview
Toivonen, H. 2012 In: Bisociative Knowledge Discovery. Berthold, M. R. (ed.). Springer, p. 144–146. 3 p. (Lecture Notes in Artificial Intelligence (LNAI); 7250).Publication: Contribution to book/anthology ⺠B2 Contribution to book/other compilations (non-refereed)
Patterns and Logic for Reasoning with Networks
Kimmig, A. , Galbrun, E. , Toivonen, H. & De Raedt, L. 2012 In: Bisociative Knowledge Discovery. Berthold, M. R. (ed.). Springer, p. 122-143. 22 p. (Lecture Notes in Artificial Intelligence (LNAI); 7250).Publication: Contribution to book/anthology ⺠B2 Contribution to book/other compilations (non-refereed)
Privacy Preservation by k-Anonymization of Weighted Social Networks
Skarkala, M. E. , Maragoudakis, M. , Gritzalis, S. , Mitrou, L. , Toivonen, H. & Moen, P. 2012 p. 423-428. 6 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Retrieval of Relevant and Non-redundant Nodes
Langohr, L. A. & Toivonen, H. 28.04.2012Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Review of BisoNet Abstraction Techniques
Zhou, F. , Mahler, S. J. & Toivonen, H. 2012 In: Bisociative Knowledge Discovery. Berthold, M. R. (ed.). Springer-Verlag, p. 166–178. 13 p. (Lecture Notes in Artificial Intelligence (LNAI); 7250).Publication: Contribution to book/anthology ⺠B2 Contribution to book/other compilations (non-refereed)
Semantic Subgroup Discovery and Cross-context Linking for Microarray Data Analysis
Mozetic, I. , Lavrac, N. , Podpecan, V. , Novak, P. K. , Motaln, H. , Petek, M. , Gruden, K. , Toivonen, H. & Kulovesi, K. 2012 In: Bisociative Knowledge Discovery. Berthold, M. R. (ed.). Springer, p. 379-389. 11 p. (Lecture Notes in Artificial Intelligence (LNAI); 7250).Publication: Contribution to book/anthology ⺠B2 Contribution to book/other compilations (non-refereed)
Sleep Musicalization: Automatic Music Composition from Sleep Measurements
Tulilaulu, A. , Paalasmaa, J. , Waris, M. & Toivonen, H. 25.10.2012 p. 392-403. 12 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Term Association Analysis for Named Entity Filtering
Gross, O. , Doucet, A. & Toivonen, H. 20.11.2012 p. 67. 11 p.Publication: Conference contribution ⺠B3 Unrefereed article in conference proceedings
Unobtrusive Online Monitoring of Sleep at Home
Paalasmaa, J. , Waris, M. , Toivonen, H. , Leppäkorpi, L. & Partinen, M. 28.08.2012 p. 3784-3788. 5 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
2011
Compression of Weighted Graphs
Toivonen, H. , Zhou, F. , Hartikainen, A. & Hinkka, A. 2011 p. 965-973.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
SegMine workflows for semantic microarray data analysis in Orange4WS
Podpecan, V. , Lavrac, N. , Mozetic, I. , Kralj Novak, P. , Trajkovski, I. , Langohr, L. , Kulovesi, K. , Toivonen, H. , Petek, M. , Motaln, H. & Gruden, K. 2011 In : BMC Bioinformatics. 2011/12, 416Publication: Contribution to journal ⺠A1 Refereed journal article
2010
A Framework for Path-Oriented Network Simplification
Toivonen, H. , Mahler, S. & Zhou, F. 05.2010 p. 220-231. 12 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Apriori Algorithm
Toivonen, H. 2010 In: Encyclopedia of Machine Learning. Sammut, C. & Webb, G. I. (eds.). 1. ed. SpringerPublication: Contribution to book/anthology ⺠D2 Article in professional hand or guide book or in a professional data system, or text book material
Association Rule
Toivonen, H. 2010 In: Encyclopedia of Machine Learning. Sammut, C. & Webb, G. I. (eds.). 1. ed. SpringerPublication: Contribution to book/anthology ⺠D2 Article in professional hand or guide book or in a professional data system, or text book material
Basket Analysis
Toivonen, H. 2010 In: Encyclopedia of Machine Learning. Sammut, C. & Webb, G. I. (eds.). 1. ed. SpringerPublication: Contribution to book/anthology ⺠D2 Article in professional hand or guide book or in a professional data system, or text book material
Bisociative knowledge discovery for microarray data analysis
Mozetic, I. , Lavrac, N. , Podpecan, V. , Novak, P. K. , Motaln, H. , Petek, M. , Gruden, K. , Toivonen, H. & Kulovesi, K. 2010 p. 190-199. 10 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Fast Discovery of Reliable k-terminal Subgraphs
Kasari, M. , Toivonen, H. & Hintsanen, P. 2010 p. 168-177. 10 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Fast Discovery of Reliable Subnetworks
Hintsanen, P. , Toivonen, H. & Sevon, P. 2010 p. 104-111. 8 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Frequent Itemset
Toivonen, H. 2010 In: Encyclopedia of Machine Learning. Sammut, C. & Webb, G. I. (eds.). 1. ed. SpringerPublication: Contribution to book/anthology ⺠D2 Article in professional hand or guide book or in a professional data system, or text book material
Frequent Pattern
Toivonen, H. 2010 In: Encyclopedia of Machine Learning. Sammut, C. & Webb, G. I. (eds.). 1. ed. SpringerPublication: Contribution to book/anthology ⺠D2 Article in professional hand or guide book or in a professional data system, or text book material
Network Simplification with Minimal Loss of Connectivity
Zhou, F. , Mahler, S. J. & Toivonen, H. 12.2010 p. 659-668 . 10 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Predicting and preventing student failure - using the k-nearest neighbour method to predict student performance in an online course environment
Tanner, T. & Toivonen, H. 2010 In : International Journal of Learning Technology. 5, 4, p. 356-377. 12 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Probabilistic Inductive Querying Using ProbLog
De Raedt, L. , Kimmig, A. , Gutmann, B. , Kersting, K. , Santos Costa, V. & Toivonen, H. 2010 In: Inductive Databases and Constraint-Based Data Mining. Dzeroski, S., Goethals, B. & Panov, P. (eds.). Springer, p. 229-262.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
2009
Apparatus and method for facilitating contact selection in communication devices
Sorvari, A. , Kähäri, M. , Toivonen, H. , Gheorghiu, C. & Salmenkaita, J-P. 2009 USA. 25.08.2009Publication: Patent ⺠H1 Patents
Constructing information networks from textual documents
Jursic, M. , Lavrac, N. , Mozetic, I. , Podpecan, V. & Toivonen, H. 2009 p. 23-38. 16 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Finding representative nodes in probabilistic graphs
Langohr, L. & Toivonen, H. 2009 p. 65-76. 12 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Location-based novelty index value and recommendation system and method
Räsänen, E. , Kikta, R. , Sorvari, A. , Salmenkaita, J-P. , Huhtala, Y. , Mannila, H. , Toivonen, H. , Oinonen, K. & Murto, J. 2009 USA. 05.05.2009Publication: Patent ⺠H1 Patents
Review of network abstraction techniques
Zhou, F. , Mahler, S. & Toivonen, H. 2009 p. 50-63. 14 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
System and method for providing context sensitive recommendations to digital services
Sorvari, A. , Kähäri, M. , Toivonen, H. , Mannila, H. & Salmenkaita, J-P. 2009 USA. 04.08.2009Publication: Patent ⺠H1 Patents
2008
A method and a device for frequency counting
Toivonen, H. , Sorvari, A. & Kähäri, M. 2008 South Korea. 18.01.2008Publication: Patent ⺠H1 Patents
Automatic personal playlist generation with implicit user feedback
Toivonen, H. & Pyhälammi, S. 2008 USA. 18.03.2008Publication: Patent ⺠H1 Patents
Compressing probabilistic Prolog programs
De Raedt, L. , Kersting, K. , Kimmig, A. , Revoredo, K. & Toivonen, H. 2008 In : Machine Learning. 70, 2-3, p. 151-168. 18 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Finding reliable subgraphs from large probabilistic graphs
Hintsanen, P. & Toivonen, H. 2008 In : Data Mining and Knowledge Discovery. 17, 1, p. 3-23. 21 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Finding reliable subgraphs from large probabilistic graphs
Hintsanen, P. & Toivonen, H. 2008 In: Machine learning and knowledge discovery in databases. Berlin: SpringerPublication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
2007
Constrained hidden Markov models for population-based haplotyping
Landwehr, N. , Mielikäinen, T. , Eronen, L. , Toivonen, H. & Mannila, H. 2007 In : BMC Bioinformatics. 8, 2, 9 sPublication: Contribution to journal ⺠A1 Refereed journal article
Probabilistic Explanation Based Learning
De Raedt, L. , Kimmig, A. & Toivonen, H. 2007 p. 176-187. 12 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
ProbLog: a probabilistic prolog and its application in link discovery
De Raedt, L. , Kimmig, A. & Toivonen, H. 2007 p. 2468-2473. 6 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Summer School on Algorithmic Data Analysis (SADA 2007) and Annual Hecse Poster Session
Mäkinen, V. (ed.), Linden, G. (ed.) & Toivonen, H. (ed.) 2007 Helsinki: Helsingin yliopisto, tietojenkäsittelytieteen laitos. 110 p. (Series of publications / Department of Computer ScienceB; 2007-4).Publication: Book/anthology ⺠C2 Edited book, compilation, conference proceeding or special issue of journal
System and method for generating descriptive link names
Toivonen, H. , Sorvari, A. & Kähäri, M. 2007 USA. 14.08.2007Publication: Patent ⺠H1 Patents
2006
A survey of data mining methods for linkage disequilibrium mapping
Onkamo, P. & Toivonen, H. 2006 In : Human Genomics. 2, 5, p. 336-340. 5 p.Publication: Contribution to journal ⺠A1 Refereed journal article
An empirical comparison of case-control and trio based study designs in high throughput association mapping
Hintsanen, P. , Sevon, P. , Onkamo, P. , Eronen, L. & Toivonen, H. 2006 In : Journal of Medical Genetics. 43 (2006), 8 sPublication: Contribution to journal ⺠A1 Refereed journal article
Closed non-derivable itemsets
Muhonen, J. & Toivonen, H. 2006 p. 601-608. 8 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Constrained Hidden Markov Models for population-based haplotyping
Landwehr, N. , Mielikäinen, T. , Eronen, L. , Toivonen, H. & Mannila, H. 2006 In: Probabilistic modeling and machine learning in structural and systems biology. Helsinki: Helsinki University Printing House, p. 38-43. 6 p.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
HaploRec: efficient and accurate large-scale reconstruction of haplotypes
Eronen, L. , Geerts, F. & Toivonen, H. 2006 In : BMC Bioinformatics. 7, 542, 38 sPublication: Contribution to journal ⺠A1 Refereed journal article
Link discovery in graphs derived from biological databases
Sevon, P. , Eronen, L. , Hintsanen, P. , Kulovesi, K. & Toivonen, H. 2006 In: Data integration in the life sciences. Berlin: Springer, p. 35-49. 15 p.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
Menettely tietoelementin lataamiseksi langattomaan päätelaitteeseen
Kähäri, M. , Sorvari, A. & Toivonen, H. 2006 Finland. 31.07.2006Publication: Patent ⺠H1 Patents
TreeDT: tree pattern mining for gene mapping
Sevon, P. , Toivonen, H. & Ollikainen, V. 2006 In : IEEE/ACM Transactions on Computational Biology and Bioinformatics. 3, 2, p. 174-185. 12 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Visualisation of associations between nucleotides in SNP neighbourhoods
Kulovesi, K. , Muhonen, J. , Lappalainen, I. , Riikonen, P. T. , Vihinen, M. , Toivonen, H. & Pasanen, T. 2006 In: Intelligent data analysis in biomedicine and pharmacology. Verona: University of Verona, p. 61-62. 2 p.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
2005
Combining phenotypic and genotypic data to discover multiple disease genes
Toivonen, H. , Hyvönen, S. & Sevon, P. 2005 p. 7-14. 8 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
ContextPhone: a prototyping platform for context-aware mobile applications
Raento, M. , Oulasvirta, A. , Petit, R. & Toivonen, H. 2005 In : IEEE Pervasive Computing. 4, 2, p. 51-59. 9 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Data mining for gene mapping
Toivonen, H. , Onkamo, P. , Hintsanen, P. , Terzi, E. & Sevon, P. 2005 In: Next generation of data-mining applications. Hoboken, N.J: Wiley-Interscience, p. 263-293. 31 p.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
Data mining in bioinformatics
Wang, J. T. L. & Toivonen, H. 2005 New York: Springer. (Advanced information and knowledge processing).Publication: Book/anthology ⺠C1 Published scientific monograph
Efficient Markovian algorithms for haplotype reconstruction
Eronen, L. , Geerts, F. & Toivonen, H. 2005 In: Modernin informaatioteknologian menetelmätutkimusta. Petroskoi: Petroskoin yliopisto, p. 16-39. 24 p.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
Gene Mapping by Pattern Discovery: chapter 6
Sevon, P. , Toivonen, H. T. T. & Onkamo, P. 2005 In: Data mining in bioinformatics. New York: Springer, p. 105-126. 22 p.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
Introduction to data mining in bioinformatics: chapter 1
Wang, J. T. L. , Zaki, M. J. , Toivonen, H. T. T. & Shasha, D. 2005 In: Data mining in bioinformatics. New York: Springer, p. 3-8. 6 p.Publication: Contribution to book/anthology ⺠A3 Contribution to book/other compilations (refereed)
Method for controlling operation of a mobile device by detecting usage situations
Himberg, J. , Mannila, H. , Korpiaho, K. , Toivonen, H. & Tikanmäki, J. 2005 USA. 28.06.2005Publication: Patent ⺠H1 Patents
Method for gene mapping from chromosome and phenotype data
Toivonen, H. , Onkamo, P. , Vasko, K. , Ollikainen, V. V. , Sevon, P. , Mannila, H. & Kere, J. 21.06.2005 USA. 20.05.2010Publication: Patent ⺠H1 Patents
Mining non-derivable association rules
Goethals, B. , Muhonen, J. , Toivonen, H. & Muhonen, J. 2005 p. 239-249. 11 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Sosiaalista tilatietoa kontekstipuhelimella
Raento, M. , Oulasvirta, A. , Toivonen, H. & Mäntylä, M. 2005 In : Prosessori. 2005, 1, p. 54-56. 3 p.Publication: Contribution to journal ⺠E1 Popular article, newspaper article
2004
Adaptive On-device Location Recognition
Laasonen, K. , Raento, M. & Toivonen, H. 2004 p. 287-304.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
2002
Association analysis for quantitative traits by data mining: QHPM
Onkamo, P. , Ollikainen, V. , Sevon, P. , Toivonen, H. T. T. , Mannila, H. & Kere, J. 2002 In : Annals of Human Genetics. 2002, 66, p. 419-429. 11 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Menetelmä, muistiväline ja tietokonejärjestelmä geenipaikannukseen kromosomi- ja fenotyyppidatasta
Sevon, P. , Toivonen, H. & Ollikainen, V. V. 2002 C12Q 1/68 ; G06F 17/00 //G06F 159:00 15.11.2004Publication: Patent ⺠H1 Patents
2001
Gene mapping by haplotype pattern mining
Toivonen, H. , Onkamo, P. , Vasko, K. , Ollikainen, V. V. , Sevon, P. , Mannila, H. & Kere, J. 2001 p. 99-108. 10 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Mining associations between genetic markers, phenotypes, and covariates
Sevon, P. , Ollikainen, V. , Onkamo, P. , Toivonen, H. T. T. , Mannila, H. & Kere, J. 2001 In : Genetic Epidemiology. 2001, 21, p. S588-S593. 6 p.Publication: Contribution to journal ⺠A1 Refereed journal article
Second-generation association study of the 5q31 cytokine gene cluster and the interleukin-4 receptor in asthma
Kauppi, P. , Lindblad-Toh, K. , Sevon, P. , Toivonen, H. T. T. , Rioux, J. D. , Villapakkam, A. , Laitinen, L. A. , Hudson, T. J. , Kere, J. & Laitinen, T. 2001 In : Genomics. 2001, 77, p. 35-42. 8 p.Publication: Contribution to journal ⺠A1 Refereed journal article
2000
Data mining applied to linkage disequilibrium mapping
Toivonen, H. T. T. , Onkamo, P. , Vasko, K. , Ollikainen, V. , Sevon, P. , Mannila, H. , Herr, M. & Kere, J. 2000 In : American Journal of Human Genetics. 2000, 67, p. 133-145. 13 p.Publication: Contribution to journal ⺠A1 Refereed journal article
1996
Knowledge discovery from telecommunication network alarm databases
Hatonen, K. , Klemettinen, M. , Mannila, H. , Ronkainen, P. & Toivonen, H. 1996 p. 115-122. 8 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
TASA: Telecommunications alarm sequence analyzer
Hatonen, K. , Klemettinen, M. , Mannila, H. , Ronkainen, P. & Toivonen, H. 1996 p. 520-529. 10 p.Publication: Conference contribution ⺠A4 Article in conference publication (refereed)
Address: Department of Computer Science, P.O. 68 (Gustaf Hällströmin katu 2b), FI-00014 UNIVERSITY OF HELSINKI, FINLAND
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