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Software

  • BEANDisco (Bayesian Exact and Approximate Network Discovery) – A program for exact and approximate Bayesian structure discovery in Bayesian networks
    (c) 2011 T. Niinimäki, P. Parviainen, M. Koivisto, HIIT and University of Helsinki. (See publications for details.) here.

  • REBEL (Rapid Exact Bayesian Edge Learning) – A program for exact Bayesian structure discovery in Bayesian networks
    (c) 2006 M. Koivisto and K. Sood, HIIT Basic Research Unit, University of Helsinki. (See publications for details.) [Download.]

  • HIT (Haplotype Inference Technique) – A program for reconstructing haplotypes from unphased genotype data using a hidden Markov model
    (c) 2005 P. Rastas, University of Helsinki. (See publications for other contributors and details.) HIT is available here.

  • MDLBlockFinder – A Minimum Description Length -based method for the analysis of haplotype blocks
    (c) 2003 M. Koivisto, H. Mannila, M. Lukk, K. Sood, and E. Ukkonen (see publications for other contributors). University of Helsinki and HIIT BRU. [Download for Linux/Unix.]

Contact | Publications | Research | Software | Teaching

Last modified Oct 16, 2011.