Vuosikertomus 2009

Vuosikertomus 2009

Julkaisut

Kirjat

Hyvärinen, Aapo; Hurri, Jarmo; Hoyer, Patrik O.
Natural image statistics. New York: Springer, 2009.

 

Vertaisarvioidut artikkelit aikakausjulkaisuissa

Abrahamsson, Pekka; Conboy, Kieran; Wang, Xiaofeng.
Lots done, more to do: European journal of information systems: an official journal of the Operational Research Society 18 (2009): 4, pp. 281-284.

Ala-Härkönen, Väinö; Brunberg, Jussi; Lemström, Kjell; Mikkilä, Niko.
A content-based music retrieval engine: Musicae scientiae: the journal of the European Society for the Cognitive Sciences of Music 4B (2009), pp. 235-256.

Arkin, Esther M; Bae, Sang Won; Efrat, Alon; Okamoto, Kazuya; Mitchell, Joseph pp. B; Polishchuk, Valentin.
Geometric stable roommates. Information processing letters 109 (2009): 4, pp. 219-224.

Arkin, Esther M; Fekete, Sándor P; Islam, Kamrul; Meijer, Henk; Mitchell, Joseph pp. B; Nunez-Rodriguez, Yurai; Polishchuk, Valentin; Rappaport, David. ; Xiao, Henry.
Not being (super)thin or solid is hard: a study of grid Hamiltonicity. Computational geometry: theory and applications 42 (2009): 6-7, pp. 582-605.

Bertsekas, Dimitri P; Yu, Huizhen.
Projected equation methods for approximate solution of large linear systems. Journal of computational and applied mathematics 227 (2009), pp. 27-50.

Bingham, Ella; Mannila, Heikki.
Complexity control in a mixture model by the Hardy-Weinberg equilibrium. Computational statistics & data analysis 53 (2009): 5, pp. 1711-1719.

Fischer, Johannes; Mäkinen, Veli; Navarro, Gonzalo.
Faster entropy-bounded compressed suffix trees. Theoretical computer science 410 (2009), pp. 5354-5364.

Ghanam, Yaser; Maurer, Frank; Abrahamsson, Pekka; Cooper, Kendra.
A report on the XP workshop on agile product line engineering. Software engineering notes: an informal newsletter of the Special Interest Committee on Software Engineering 34 (2009): 5, pp. 25-27.

Gutmann, Michael; Hyvärinen, Aapo.
Learning spike-timings based representations of sensory stimuli with leaky integrate-and-fire neurons. BMC neuroscience 10 (2009): 144, 2 pp.

Heikkinen, Tiina.
Decoupling and agricultural investment with disinvestment flexibility: International journal of agricultural resources, governance and ecology 8 (2009): 4, pp. 300-317.

Heikkinen, Tiina.
Spatial economic self-organization with periodic and quasiperiodic dynamics. Jahrbuch fur Regionalwissenschaft 29 (2009), pp. 161-183.

Heikkinen, Tiina; Hottinen, Ari.
Distributed scheduling in a time-varying ad hoc network. Journal of mobile multimedia: JMM 5 (2009): 3, pp. 238-254.

Henriksson, Linda; Hyvärinen, Aapo; Vanni, Simo.
Representation of cross-frequency spatial phase relationships in human visual cortex. Journal of neuroscience 29 (2009): 45, pp. 14342-14351.

Jouhten, Paula; Pitkänen, Esa; Pakula, Tiina; Saloheimo, Markku; Penttila, Merja; Maaheimo, Hannu.
13C-metabolic flux ratio and carbon path analyses confirmed that Trichoderma reesei uses primarily the respirative pathway also on the preferred carbon source glucose. BMC systems biology 3 (2009): 104, 16 pp.

Kaski, Petteri; Östergård, Patric R. J.
Classification of resolvable balanced incomplete block designs: Mathematica Slovaca 59 (2009), pp. 121-136.

Kaski, Petteri; Östergård, Patric R. J.
There are 1,132,835,421,602,062,347 nonisomorphic one-factorizations of K14. Journal of combinatorial designs 17 (2009), pp. 147-159.

Kaski, Petteri; Östergård, Patric R. J; Pottonen, Olli; Kiviluoto, Lasse.
A catalogue of the Steiner triple systems of order 19. Bulletin of the Institute of Combinatorics and its Applications 57 (2009), pp. 35-41.

Korhonen, Janne; Martinmaki, Petri; Pizzi, Cinzia; Rastas, Pasi; Ukkonen, Esko.
MOODS: Bioinformatics 25 (2009): 23, pp. 3181-3182.

Linge, J. P; Steinberger, R; Weber, T. P ; Yangarber, Roman; van der Goot, E; Khudhairy, D. H; Stilianakis, N. I.
Internet surveillance systems for early alerting of health threats. Euro surveillance European communicable disease quarterly 14 (2009): 13, 2 pp.

Mavroeidis, Dimitrios; Bingham, Ella.
Enhancing the stability and efficiency of spectral ordering with partial supervision and feature selection Knowledge and information systems. 23 pp.

Nicolas, François; Mäkinen, Veli; Ukkonen, Esko.
Efficient construction of maximal and minimal representations of motifs of a string. Theoretical computer science 410 (2009), pp. 2999-3005.

Pitkänen, Esa; Jouhten, Paula; Rousu, Juho.
Inferring branching pathways in genome-scale metabolic networks. BMC systems biology 3 (2009): 103, 22 pp.

Polishchuk, Valentin; Suomela, Jukka.
A simple local 3-approximation algorithm for vertex cover. Information processing letters 109 (2009): 12, pp. 642-645.

Roos, Teemu; Heikkila, Tuomas.
Evaluating methods for computer-assisted stemmatology using artificial benchmark data sets. Literary and linguistic computing 24 (2009): 4, pp. 417-433.

Roos, Teemu; Myllymäki, Petri; Rissanen, Jorma.
MDL denoising revisited. IEEE transactions on signal processing 57 (2009): 9, pp. 3347-3360.

Shimitsu, Shohei; Hoyer, Patrik O; Hyvärinen, Aapo.
Estimation of linear non-Gaussian acyclic models for latent factors. Neurocomputing 72 (2009): 7-9, pp. 2024-2027.

Suominen, Osma; Hyvönen, Eero; Viljanen, Kim; Hukka, Eija.
HealthFinland: Web semantics science, services and agents on the World Wide Web 7 (2009): 4, pp. 287-297.

Tuupanen, Sari; Turunen, Mikko; Lehtonen, Rainer; Hallikas, Outi; Vanharanta, Sakari; Kivioja, Teemu; Björklund, Mikael; Wei, Gonghong; Yan, Jian; Niittymaki, Iina; Mecklin, Jukka-Pekka; Järvinen, Heikki J; Ristimaki, Ari; Di-Bernardo, Mariachiara; East, Phil; Carvajal-Carmona, Luis; Houlston, Richard S; Tomlinson, Ian; Palin, Kimmo; Ukkonen, Esko. ; Karhu, Auli; Taipale, Jussi; Aaltonen, Lauri A.
The common colorectal cancer predisposition SNP rs6983267 at chromosome 8q24 confers potential to enhanced Wnt signaling. Nature genetics 41 (2009): 8, pp. 885-890.

Ukkonen, Esko.
Maximal and minimal representations of gapped and non-gapped motifs of a string. Theoretical computer science 410 (2009): 43, pp. 4341-4349.

Vesala, Timo; Launiainen, Samuli; Kolari, P; Pumpanen, J; Sevanto, Sanna; Hari, P; Nikinmaa, E; Kaski, Petteri; Mannila, Heikki; Ukkonen, Esko; Piao, S; Ciais, P.
Autumn warming and carbon balance of a boreal Scots pine forest in Southern Finland. Biogeosciences discussions 6 (2009), pp. 7053-7081.

Vingron, Martin; Brazma, Alvis; Coulson, Richard; van Helden, Jacques; Manke, Thomas; Palin, Kimmo; Sand, Olivier; Ukkonen, Esko.
Integrating sequence, evolution and functional genomics in regulatory genomics. Genome biology 10 (2009): 1, 202, 8 pp.

Välimäki, Niko; Mäkinen, Veli; Gerlach, W; Dixit, K.
Engineering a compressed suffix tree implementation. Journal of experimental algorithmics 14 (2009): 4.2, 23 pp.

Wessman, Jaana; Paunio, Tiina; Tuulio-Henriksson, Annamari; Koivisto, Mikko; Partonen, Timo; Suvisaari, Jaana; Turunen, Joni A; Wedenoja, Juho; Hennah, William; Pietilainen, Olli; Lonnqvist, Jouko; Mannila, Heikki; Peltonen, Leena
Mixture model clustering of phenotype features reveals evidence for association of DTNBP1 to a specific subtype of schizophrenia. Biological psychiatry 66 (2009) 11, s. 990-996.

Yu, Huizhen; Bertsekas, Dimitri P.
Convergence results for some temporal difference methods based on least squares. IEEE transactions on automatic control 54 (2009): 7, pp. 1515-1531.
 

Vertaisarvioidut artikkelit konferenssijulkaisuissa ja toimitetuissa kirjoissa

Ahonen, Eeva; Hyvönen, Eero.
Publishing historical texts on the Semantic Web: ICSC 2009: IEEE Computer Society. 7 pp.

Ahonen, Teppo E.
Measuring harmonic similarity using PPM-based compression distance. Proceedings of the Workshop on Exploring Musical Information Spaces, ECDL 2009, Corfu, Greece, October 2009. - cop. 2009. pp. 52-55.

Apiola, Mikko; Kurhila, Jaakko; Lattu, Matti; Pasanen, Tomi A.
Applying creativity to teaching in computer science: AIED 2009: Editors and Co-Chairs: Scotty D. Craig, Darina Dicheva. - cop. 2009. pp. 25-31.

Babar, Muhammad Ali; Abrahamsson, Pekka.
Architecture-centric methods and agile approaches. Agile processes in software engineering and extreme programming: Pekka Abrahamsson, Michele Marchesi, Frank Maurer (eds.). -. pp. 232-233.

Björklund, Andreas; Husfeldt, Thore; Kaski, Petteri; Koivisto, Mikko.
Counting paths and packings in Halves. Algorithms - ESA 2009 edited by Amos Fiat, Peter Sanders. pp. 578-586.

Coulson, R; Manke, T; Palin, K; Roider, H; Sand, O; van Helden, J; Ukkonen, Esko ; Vingron, M; Brazma, A.
From gene expression profiling to gene regulation Modern genome annotation: Dmitrij Frishman, Alfonso Valencia, editors. pp. 105-119.

Daniel, Laila; Kojo, Markku.
The performance of multiple TCP flows with vertical handoff. Proceedings of the Seventh ACM International Symposium on Mobility Management and Wireless Access, October 26-27, 2009, Tenerife, Canary Islands, Spain: sponsored by: ACM SIGSIM. pp. 17-25.

Duus, Seppo; Kaivola, Taina; Kavonen, Antti; Kurhila, Jaakko; Kutvonen, Lea; Laine, Harri; Luukkainen, Matti; Ruokolainen, Toni.
Ohjelmistojarjestelmien mallinnuksen oppimisen edistaminen opetusteknologiaa kayttaen. Tietojenkasittelytieteen paivat 2009 / Barbro Back, Ville Leppanen (toim.) . 4 pp.

Ehmke, Martin; Forsgren, Harri; Grahn, Kaj; Karlsson, Jonny.
Securing control signaling in Mobile IPv6 with identity-based encryption. Issues in informing science & information technology 6 (2009), pp. 649-667.

Elovaara, Esa.
MDL-based attribute models in naive Bayes classification. Proceedings of the Second Workshop on Information Theoretic Methods in Science and Engineering, August 17-19, 2009, Tampere, Finland. 6 pp.

Eshuis, Rik; Norta, Alex.
Constructing process views for service outsourcing. Proceedings of the 24th ACM Symposium on Applied Computing, 9-12 March 2009, Honolulu, Hawaii, USA: Sung Y. Shin, Sascha Ossowski (Eds.). pp. s. 1615-1616.

Floréen, Patrik; Kaasinen, Joel; Kaski, Petteri; Suomela, Jukka.
An optimal local approximation algorithm for max-min linear programs. SPAA'09: sponsored by ACM SIGACT & ACM SIGARCH. pp. 260-269.

Forsgren, Harri; Grahn, Kaj; Karlsson, Jonny; Karvi, Timo; Pulkkis, Goran.
IBE based group key agreement protocols. Identity and privacy in the internet age: Audun J?sang, Torleiv Maseng, Svein Johan Knapskog (eds.) pp. 22-29.

Fraser, Steven; Abrahamsson, Pekka; Davies, Rachel; Kerievsky, Joshua; Poppendieck, Mary; Succi, Giancarlo.
The future of lean in an agile world. Agile processes in software engineering and extreme programming: Pekka Abrahamsson, Michele Marchesi, Frank Maurer (eds.). pp. 263-266.

Frosterus, Matias; Hyvönen, Eero.
Bridging the search gap between the Web of pages and Web of data by combining ontological document expansion with text search. Proceedings of the International Conferences on Digital Libraries and the Semantic Web 2009, September, 2009, Trento, Italy. - cop. 2009. 15 pp.

Ghanam, Yaser; Cooper, Kendra; Abrahamsson, Pekka; Maurer, Frank.
XP workshop on agile product line engineering. Agile processes in software engineering and extreme programming: Pekka Abrahamsson, Michele Marchesi, Frank Maurer (eds.). -. pp. 215-216.

Gutmann, Michael; Hyvärinen, Aapo.
Learning features by contrasting natural images with noise. Proceedings of the 19th International Conference on Artificial Neural Networks (ICANN-09), Limassol, Cyprus, 14-17 September, 2009. pp. 623-632.

Gutmann, Michael; Hyvärinen, Aapo.
Learning reconstruction and prediction of natural stimuli by a population of spiking neurons. European 17th Symposium on Artificial Neural Networks: - 2009. 6 pp.

Gutmann, Michael; Hyvärinen, Aapo.
Unsupervised learning by discriminating data from artificial noise. Proceedings of NIPS 2009 Workshop: 4 pp.

Haapasalo, Tuukka; Jaluta, Ibrahim; Seeger, Bernhard; Sippu, Seppo; Soisalon-Soininen, Eljas.
Transactions on the multiversion B+-tree. Proceedings of the 12th International Conference on Extending Database Technology, March 24-26, 2009, Saint Petersburg, Russia editors Martin Kersten .. et al. . pp. 1064-1075.

Haapasalo, Tuukka; Sippu, Seppo; Jaluta, Ibrahim; Soisalon-Soininen, Eljas.
Concurrent updating transactions on versioned data. Proceedings of the 2009 International Database Engineering & Applications Symposium, September 16-18, 2009, Cetraro, Calabria, Italy / General Chairs: Bipin C. Desai. pp. 77-87.

Hämäläinen, Wilhelmiina.
Lift-based search for significant dependencies in dense data sets. Proceedings of the KDD-09 Workshop on Statistical and Relational Learning in Bioinformatics, June, 28th, 2009, Paris, France / Conference Chairs: Christophe Costa Florencio, Fabrizio Costa Jan Ramon, Joost Kok. - ACM, cop. 2009. 5 pp.

Hofte ter, Henri; Løvborg Jensen, Kasper; Nurmi, Petteri; Froehlich, Jon.
Mobile living labs 09: Proceedings of the 11th International Conference on Human-Computer Interaction with Mobile Devices and Services: Eds. Reinhard Oppermann, Markus Eisenhauer, Matthias Jarke, Volker Wulf. 2 pp.

Hoyer, Patrik O; Hyttinen, Antti.
Bayesian discovery of linear acyclic causal models. Uncertainty in Artificial Intelligence: UAI-2009. 9 pp.

Hoyer, Patrik O; Janzing, Dominik; Mooij, Joris; Peters, Jonas; Scholkopf, Bernhard.
Nonlinear causal discovery with additive noise models. Advances in neural information processing systems 21: edited by Daphne Koller .. et al. . - NIPS Foundation cop. 2009 pp. 689-696.

Hyvönen, Eero.
Semantic portals for cultural heritage. Handbook on ontologies / Steffen Staab, Rudi Studer (eds.) 23 pp.

Hyvönen, Eero; Makela, Eetu; Kauppinen, Tomi; Alm, Olli; Kurki, Jussi; Ruotsalo, Tuukka; Seppala, Katri; Takala, Joeli; Puputti, Kimmo; Kuittinen, Heini. ; Viljanen, Kim.
CultureSampo: Proceedings of the 1st International Symposium on Digital Humanities for Japanese Arts and Cultures (DH-JAC-2009), Ritsumeikan University, Kyoto, Japan, March, 2009. - cop. 2009. 8 pp.

Ikonen, Marko; Kurhila, Jaakko.
Discovering high-impact success factors in Capstone software projects. Proceedings of the 10th ACM Conference on SIG-information Technology Education, October 22 - 24, 2009 / general chairs Don Gantz ; program chairs Ken A. Baker, Daniel Garrison. pp. 235-244.

Järvinen, Ilpo; Kojo, Markku.
Improving processing performance of Linux TCP SACK implementation. PFLDNeT 2009: Co-Chairs: Lars Eggert, Kei Hiraki ; sponsored by JSPS 163rd Committee on Internet Technology (ITRC). - 2009. pp. 71-76.

Jursic, Matjaz; Lavrac, Nada; Mozetic, Igor; Podpecan, Vid; Toivonen, Hannu.
Constructing information networks from textual documents. Proceedings of the Workshop on Explorative Analytics of Information Networks 2009 European Conference on Machine Learning and Principles and Practice of K14wledge Discovery in Databases, Bled, Slovenia, September 11, 2009 / - -, pp. 23-38.

Kaipiainen, Samuli; Paksula, Matti.
SVG vs. Canvas on trivial drawing application. Proceedings of 7th International Conference on Scalable Vector Graphics, October 2-4, 2009, Mountain View, California, USA. - 2009. 13 pp.

Kangasharju, Jussi.
Building the future Internet. Proceedings of AMICT'2008: Vol. 10 / editors: Jussi Kangasharju, Yury A. Bogoyavlenskiy. pp. 20-25.

Karlstedt, Mika.
Virtualization in high-availability environments. Proceedings of AMICT'2008: Vol. 10 / editors: Jussi Kangasharju, Yury A. Bogoyavlenskiy. pp. 34-49.

Kauppinen, Tomi; Puputti, Kimmo; Paakkarinen, Panu; Kuittinen, Heini; Vaatainen, Jari; Hyvönen, Eero.
Learning and visualizing cultural heritage connections between places on the Semantic Web. Proceedings of the Workshop on Inductive Reasoning and Machine Learning on the Semantic Web (IRMLeS 2009), Heraklion, Greece, May 31 - June 4, 2009. - cop. 2009. 12 pp.

Koivisto, Mikko.
Partitioning into sets of bounded cardinality. Parameterized and exact computation: Jianer Chen, Fedor V. Fomin (eds.). pp. 258-263.

Köster, Urs; Hyvärinen, Aapo.
Natural image statistics: International Workshop on Local and Non-Local Approximation in Image Processing: General Chair: Jaakko Astola. - IEEE Xplore, cop. 2009. s. 16-25.

Köster, Urs; Lindgren, Jussi T; Gutmann, Michael; Hyvärinen, Aapo.
Learning natural image structure with a horizontal product model. Independent component analysis and signal separation: Tlay Adali .. et al. (eds.). pp. 507-514.

Köster, Urs; Lindgren, Jussi T; Hyvärinen, Aapo.
Estimating Markov random field potentials for natural images. Independent component analysis and signal separation: Tlay Adali .. et al. (eds.). pp. 515-522.

Kumpulainen, Kristiina; Myllymäki, Petri; Smeds, Riitta; Kronqvist, Juha; Pöyry-Lassila, Päivi.
VISCI virtual intelligent space for collaborative innovation: Proceedings of 1st. International Symposium on Tangible Software Engineering Education, October 9, 2009, Tokyo International Forum, Tokyo, Japan / edited by Taichi Nakamura .. (et al.). - 2009. pp. 75-82.

Kurki, Jussi; Hyvönen, Eero.
Authority control of people and organizations on the Semantic Web. Proceedings of the International Conferences on Digital Libraries and the Semantic Web 2009, September, 2009, Trento, Italy. - cop. 2009. 15 pp.

Langohr, Laura; Toivonen, Hannu.
Finding representative nodes in probabilistic graphs. Proceedings of the Workshop on Explorative Analytics of Information Networks 2009 Andreas Nurnberger, Michael R. Berthold, Tobias Kotter, Kilian Thiel (eds.). - 2009. pp. 65-76.

Lemström, Kjell; Wiggins, Geraint A.
Formalizing invariances for content-based music retrieval. ISMIR 2009: edited by Keiji Hirata, George Tzanetakis and Kazuyoshi Yoshii. - The International Society for Music Information Retrieval, 2009. pp. 591-596.

Lenzen, Christoph; Suomela, Jukka; Wattenhofer, Roger.
Local algorithms: Stabilization, safety, and security of distributed systems: Rachid Guerraoui, Franck Petit (eds.). pp. 17-34.

Marchenko, A; Abrahamsson, Pekka; Ihme, T.
Long-term effects of test-driven development: Agile processes in software engineering and extreme programming: Pekka Abrahamsson, Michele Marchesi, Frank Maurer (eds.). -. pp. 13-22.

Merivuori, Toni; Roos, Teemu.
Some observations on the applicability of normalized compression distance to stemmatology. Proceedings of the Second Workshop on Information Theoretic Methods in Science and Engineering, August 17-19, 2009, Tampere, Finland. 6 pp.

Mäkinen, Veli; Navarro, Gonzalo; Sirén, Jouni; Välimäki, Niko.
Storage and retrieval of individual genomes. Research in computational molecular biology: Serafim Batzoglou (ed.). pp. 121-137.

Moen, Pirjo.
Concept maps as a device for learning database concepts. Proceedings of TLAD'09, Event, 6th July 09, University of Birmingham (Spiral-bound) / editors David Nelson, Anne James. pp. 39-48.

Myllymäki, Petri.
A framework for MDL clustering. Proceedings of the Second Workshop on Information Theoretic Methods in Science and Engineering, August 17-19, 2009, Tampere, Finland. 4 pp.

Niklander, Tiina.
Automating service management. Proceedings of AMICT'2008: Vol. 10 / editors: Jussi Kangasharju, Yury A. Bogoyavlenskiy. pp. 26-33.

Norta, Alex.
Conceptually integrating e-business collaboration: Proceedings of AMICT'2008: Vol. 10 / editors: Jussi Kangasharju, Yury A. Bogoyavlenskiy. pp. 58-79.

Oza, Nilay; Abrahamsson, Pekka; Conboy, Kieran.
Positioning agility. Agile processes in software engineering and extreme programming: Pekka Abrahamsson, Michele Marchesi, Frank Maurer (eds.). pp. 206-208.

Parviainen, Pekka; Koivisto, Mikko.
Exact structure discovery in Bayesian networks with less space. Uncertainty in Artificial Intelligence: UAI-2009. pp. 436-443.

Perkiö, Jukka.
Image similarity: Proceedings of the First International Conference on Multimedia Information Networking and Security, 17-20 November, 2009, Hubei, China / sponsored by IEEE Wuhan Section, IEEE Signal Processing Society Tainan Chapter. pp. 213-219.

Perkiö, Jukka.
Magrathea: Proceedings of the 2009 IEEE/WIC/ACM International Joint Conference on Web Intelligence and Intelligent Agent Technology: - IEEE, 2009 pp. 66-75.

Perkiö, Jukka.
Modelling image complexity by independent component analysis, with application to content-based image retrieval. Proceedings of the 19th International Conference on Artificial Neural Networks (ICANN-09), Limassol, Cyprus, 14-17 September, 2009. pp. 704-714.

Perkiö, Jukka; Tuytelaars, Tinne; Buntine, Wray.
Exploring scale-induced feature hierarchies in natural images. Machine learning and applications: M. Arif Wani .. et al. (eds.). pp. 25-31.

Polishchuk, Valentin; Pääkkö, Anne; Mitchell, Joseph pp. B; Krozel, Jimmy.
Planning routes with wiggle room in en route weather-impacted airspaces. Proceedings of AIAA Guidance, Navigation, and Control Conference, 10-13 August 2009, Chigaco, IL, USA. - American Institute of Aeronautics and Astronautics, cop. 2009. -. 11 pp.

Rastas, Pasi.
A general framework for local pairwise alignment statistics with gaps. Algorithms in bioinformatics: Steven L. Salzberg, Tandy Warnow (eds.). pp. 233-245.

Rissanen, Jorma.
Model selection and testing by the MDL principle. Information theory and statistical learning / editors Frank Emmert-Streib, Matthias Dehmer. pp. 25-43.

Rizo, David; Inesta, Jose M; Lemström, Kjell.
Ensemble of state-of-the-art methods for polyphonic music comparison. Proceedings of the Workshop on Exploring Musical Information Spaces, ECDL 2009, Corfu, Greece, October 2009. - cop. 2009. pp. 46-51.

Rizo, David; Lemström, Kjell; Inesta, Jose M.
Tree representation in combined polyphonic music comparison. Computer music modeling and retrieval: Sølvi Ystad, Richard Kronland-Martinet, Kristoffer Jensen (eds.). pp. 177-195.

Roos, Teemu; Yu, Bin.
Estimating sparse models from multivariate discrete data via transformed Lasso. Proceedings of the 2009 Information Theory and Applications Workshop, University of California, San Diego, USA, February 8-13, 2009. - IEEE, 2009. 5 pp.

Roos, Teemu; Yu, Bin.
Sparse Markov source estimation via transformed Lasso. Proceedings of the 2009 IEEE Information Theory Workshop on Networking and Information Theory (ITW-09), Volos, Greece, June 10-12, 2009. - IEEE, 2009. pp. 241-245.

Rousu, Juho.
Bioinformatics: Proceedings of AMICT'2008: Vol. 10 / editors: Jussi Kangasharju, Yury A. Bogoyavlenskiy. pp. 50-57.

Ruokolainen, Toni; Kutvonen, Lea.
Managing interoperability knowledge in open service ecosystems. Proceedings of the IEEE EDOC 2009 Workshops and Short papers: edited by Vladimir Tosic. pp. 203-211.

Ruokolainen, Toni; Kutvonen, Lea.
Managing non-functional properties of inter-enterprise business service delivery. Service-oriented computing-ICSOC 2007 workshops: Elisabetta Di Nitto, Matei Ripeanu (eds.). pp. 80-92.

Ruotsalo, Tuukka; Makela, Eetu; Kauppinen, Tomi; Hyvönen, Eero; Haav, Krister; Rantala, Ville; Frosterus, Matias; Dokoohaki, Nima; Matskin, Mihhail.
Smartmuseum: Proceedings of the International Conferences on Digital Libraries and the Semantic Web 2009, September, 2009, Trento, Italy. - cop. 2009. 15 pp.

Rytkonen, Anni.
Simulating scientific work in microclimate: Proceedings of 7th International Conference on Emerging eLearning Technologies and Applications, November 19-20, 2009, The High Tatras, Slovakia / under the patronage of Jan Mikolaj, Anton Cizmar, and Slovak Rectors Conference. - 2009. 6 pp.

Saily, Tanja; Suomela, Jukka.
Comparing type counts: Corpus linguistics: edited by Antoinette Renouf and Andrew Kehoe. pp. 87-109.

Silander, Tomi; Roos, Teemu; Myllymäki, Petri.
Locally minimax optimal predictive modeling with Bayesian networks. JMLR workshop and conference proceedings -, pp. 504-511.

Silvasti, Panu; Sippu, Seppo; Soisalon-Soininen, Eljas.
Processing schema-optimized XPath filters by deterministic automata. Proceedings of the 18th International Conference on Software Engineering and Data Engineering, June 22-24, 2009, Las Vegas, Nevada, USA / Sponsored by the International Society for Computers and their Applications (ISCA). - 2009. pp. 55-60.

Silvasti, Panu; Sippu, Seppo; Soisalon-Soininen, Eljas.
Schema-conscious filtering of XML documents. Proceedings of the 12th International Conference on Extending Database Technology, March 24-26, 2009, Saint Petersburg, Russia editors Martin Kersten .. et al. . pp. 970-981.

Sirén, Jouni.
Compressed suffix arrays for massive data. String processing and information retrieval: Jussi Karlgren, Jorma Tarhio, Heikki Hyyro (eds.). pp. 63-74.

Åstrand, Matti; Floréen, Patrik; Polishchuk, Valentin; Rybicki, Joel; Suomela, Jukka; Uitto, Jara.
A local 2-approximation algorithm for the vertex cover problem. Distributed computing: edited by Idit Keidar. pp. 191-205.

Taina, Juha.
Clients in student software engineering projects. Engineering education: editor Rajarshi Roy. pp. 301-315.

Tripathi, Abhishek; Klami, Arto; Kaski, Samuel.
Using dependencies to pair samples for multi-view learning. 2009 IEEE International Conference on Acoustics, Speech, and Signal Processing 4 pp.

Tuominen, Jouni; Frosterus, Matias; Viljanen, Kim; Hyvönen, Eero.
ONKI SKOS server for publishing and utilizing SKOS vocabularies and ontologies as services. The semantic web: pp. 768-780.

Tuominen, Jouni; Kauppinen, Tomi; Viljanen, Kim; Hyvönen, Eero.
Ontology-based query expansion widget for information retrieval. Proceedings of the 5th Workshop on Scripting and Development for the Semantic Web (SFSW 2009), Heraklion, Greece, May 31 - June 4, 2009. - cop. 2009. 6 pp.

Viljanen, Kim; Tuominen, Jouni; Hyvönen, Eero.
Ontology libraries for production use: The semantic web: pp. 781-795.

Yu, Huizhen; Bertsekas, Dimitri P.
Basis function adaptation methods for cost approximation in MDP. IEEE International Symposium on Adaptive Dynamic Programming and Reinforcement Learning: Program Chair: Derong Liu . - IEEE, 2009. 8 pp.

Zhang, Kun; Hyvärinen, Aapo.
On the identifiability of the post-nonlinear causal model. In Proc. 25th Conference on Uncertainty in Artificial Intelligence (UAI2009), Montreal, Canada, AUAI Press 2009, 647-655.

Zhang, Kun; Hyvärinen, Aapo.
Causality discovery with additive disturbances: An informationtheoretical perspective. In Proc. European Conference on Machine Learning (ECML2009), LUAI 5782, 2009, 570-585.

Zhang, Kun; Peng, Heng; Chan, Laiwan; Hyvärinen, Aapo.
ICA with sparse connections: Revisited. In Proc. Int. Conference on Independent Component Analysis and Blind Signal Separation (ICA2009), LNCS 5441, 2009, 195–202.

Zhou, Fang; Mahler, Sebastien; Toivonen, Hannu.
Review of network abstraction techniques. Proceedings of the Workshop on Explorative Analytics of Information Networks 2009 Andreas Nurnberger, Michael R. Berthold, Tobias Kotter, Kilian Thiel (eds.). - 2009. pp. 50-63.
 

Väitöskirjat

Hätönen, Kimmo.
Data mining for telecommunications network log analysis. - Diss, University of Helsinki. University of Helsinki, 2009. - ii, 153 pp.

Kontkanen, Petri.
Computationally efficient methods for MDL-optimal density estimation and data clustering /. - Diss, University of Helsinki, University of Helsinki, 2009. - xii, 75, 82 pp.

Köster, Urs.
A Probabilistic approach to the primary visual cortex /. - Diss, University of Helsinki,. - Helsinki: : University of Helsinki, 2009. - viii, 77, 76 pp.

Laasonen, Kari.
Mining cell transition data /. - Diss, University of Helsinki. University of Helsinki, 2009. - viii, 148 pp.

Makkonen, Juha.
Semantic classes in topic detection and tracking /. - Diss, University of Helsinki, University of Helsinki, 2009. - x, 155 pp.

Miettinen, Pauli.
Matrix decomposition methods for data mining :. - Diss, University of Helsinki. University of Helsinki, 2009. - ix, 170 pp.

Mononen, Tommi.
Computing the stochastic complexity of simple probabilistic graphical models /. - Diss, Helsingin yliopisto, University of Helsinki, 2009. - x, 60, 48 pp.

Nurmi, Petteri.
Identifying meaningful places /. - Diss, University of Helsinki, University of Helsinki, 2009. - x, 83, 47 pp.

Rastas, Pasi.
Computational techniques for haplotype inference and for local alignment significance /. - Diss, Helsingin yliopisto, University of Helsinki, 2009. - xii, 64, 62 pp.

Silander, Tomi.
The most probable Bayesian network and beyond /. - Diss, University of Helsinki, University of Helsinki, 2009. - x, 51, 60 pp.

Suomela, Jukka.
Optimisation problems in wireless sensor networks :. - Diss, University of Helsinki. University of Helsinki, 2009. - xii, 106, 98 pp.
 

Muut julkaisut

Abrahamsson, Pekka.
Software Engineering and Advanced Applications Extreme Programming [ Elektroninen aineisto :] : IEEE, cop. 2009.

Abrahamsson, Pekka; Marchesi, Michele; Maurer, Frank.
Agile processes in software engineering and extreme programming :. - Berlin ;: Springer, cop. 2009. - xvi, 278 p.

Abrahamsson, Pekka; Oza, Nilay.
Building blocks of agile innovation /. - North Charleston, SC: Booksurge Llc, 2009.

Aroyo, Lora; Hyvönen, Eero.
The semantic web :. - Berlin: Springer-Verlag, cop. 2009. - xxii, 961 pp.

Astikainen, Katja; Holm, Liisa; Pitkänen, Esa; Rousu, Juho.
Reaction kernels: University of Helsinki, Department of Computer Science, 2009. - 13 pp.

Bertsekas, Dimitri P; Yu, Huizhen.
A unifying polyhedral approximation framework for convex optimization /. - USA: Massachusetts Institute of Technology, 2009. - 30 pp.

Bomarius, Frank; Oivo, M; Jaring, P; Abrahamsson, Pekka.
Product-focused software process improvement [ Elektroninen aineisto :] . - Berlin ;: Springer, cop. 2009. - xii, 444 pp.

Dzeroski, Saso; Geurts, Pierre; Rousu, Juho.
Machine learning in systems biology: Helsinki University Printing House, 2009. - 180 pp.

Heikkonen, Jukka; Kontoyiannis, Ioannis; Liski, Erkki P; Myllymäki, Petri; Rissanen, Jorma; Tabus, Ioan.
Proceedings of the Second Workshop on Information Theoretic Methods in Science and Engineering, August 17-19, 2009, Tampere, Finland. Tampere International Center for Signal Processing, 2009.

Ikonen, Marko.
Ohjelmistotuotantoprojektin tapaustutkimus: University of Helsinki, Department of Computer Science, 2009. - 28, 12 pp.

Ikonen, Marko.
Working toward success factors in software development projects / University of Helsinki, Department of Computer Science, 2009. - 43 pp.

Kangasharju, Jussi; Bogoyavlenskiy, Yury A.
Proceedings of AMICT'2008 :. - Petroskoi: Petroskoin yliopisto, 2009. - 156 pp.

Kucherov, Gregory; Ukkonen, Esko.
Combinatorial pattern matching :. - Berlin ;: Springer, cop. 2009. - xiii, 370 pp.

De Raedt, Luc; Kimmig, Angelika; Gutmann, Bernd; Kersting, Kristian; Santos Costa, Vítor; Toivonen, Hannu.
Probabilistic inductive querying using ProbLog. Katholieke Universiteit Leuven, Department of Computer Science 2009, 29 pp.

Ruokolainen, Toni.
Modelling framework for interoperability management in collaborative computing environments /. - Helsinki: University of Helsinki, Department of Computer Science, 2009. - iv, 159 pp.

Sarolahti, Pasi; Kojo, Markku; Yamamoto, Kazunori; Hata, Max.
Forward RTO-recovery (F-RTO): IETF Trust, 2009. - 19 pp.