Project in Biological Sequence Analysis

Syventävät opinnot
Genome resequencing competition or similar project with the goal of learning practical high-throughput sequencing data analysis skills.
Vuosi Lukukausi Päivämäärä Periodi Kieli Vastuuhenkilö
2015 kevät 12.03-30.04. 4-4 Englanti Daniel Valenzuela


Aika Huone Luennoija Päivämäärä
To 12-14 C220 Daniel Valenzuela 12.03.2015-30.04.2015


The goal of the course is that the students familiarize themselves with some bioinformatics tools and data formats frequently used in the field.
In the context of the  next-generation sequencing (NGS), the project consists in developing a variation calling pipeline,  which is nowadays a widely used method to obtain the genotype of a human organism.
The students are encouraged to work in groups of 2 -3 persons.

Kirjallisuus ja materiaali

The data for the project  can be Downloaded here.