- clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.latentVariables.ZOOPSModel
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- clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.AbstractVariableStructureModel
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- clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.ParsimoniousElement
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- clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.inhomogeneous.InhomogeneousPMM
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- clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.inhomogeneous.InhPMMParameterSet
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- Combinatorics - Class in de.jstacs.utils.functions
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Provides basic combinatorical functions
- compareTo(Partition) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.Partition
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An order among Partitions is defined according to following rules:
1. number of elements (a Partition p is smaller than a Partition p' if p contains more elements than p')
2. comparing the elements is ascending order
Two Partitions are equal if and only if they contain pairwise equal SymbolSets (not necessarily the same objects)
- compareTo(SymbolSet) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
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An order among SymbolSets is defined according to following rules:
1. number of elements (a SymbolSet s is smaller than a SymbolSet s' if s contains less elements than s')
2. comparing the elements is ascending order
Two SymbolSets are equal if and only if they contain the same symbols (not necessarily the same objects)
- contains(SymbolSet) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.Partition
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- contains(String) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
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- containsAtLeastOneElementOf(SymbolSet) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
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Checks whether at least one Symbol of t is already contained in the Partition
- createSymbolMinimalSubSets() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
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- createSymbolMinimalSubSetsAsStrings() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
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- createSymbolSets(DiscreteAlphabet) - Static method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
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- createSymbolSubSets() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
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