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clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.latentVariables.ZOOPSModel
 
clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.AbstractVariableStructureModel
 
clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.ParsimoniousElement
 
clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.inhomogeneous.InhomogeneousPMM
 
clone() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.inhomogeneous.InhPMMParameterSet
 
Combinatorics - Class in de.jstacs.utils.functions
Provides basic combinatorical functions
compareTo(Partition) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.Partition
An order among Partitions is defined according to following rules: 1. number of elements (a Partition p is smaller than a Partition p' if p contains more elements than p') 2. comparing the elements is ascending order Two Partitions are equal if and only if they contain pairwise equal SymbolSets (not necessarily the same objects)
compareTo(SymbolSet) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
An order among SymbolSets is defined according to following rules: 1. number of elements (a SymbolSet s is smaller than a SymbolSet s' if s contains less elements than s') 2. comparing the elements is ascending order Two SymbolSets are equal if and only if they contain the same symbols (not necessarily the same objects)
contains(SymbolSet) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.Partition
 
contains(String) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
 
containsAtLeastOneElementOf(SymbolSet) - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
Checks whether at least one Symbol of t is already contained in the Partition
createSymbolMinimalSubSets() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
 
createSymbolMinimalSubSetsAsStrings() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
 
createSymbolSets(DiscreteAlphabet) - Static method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
 
createSymbolSubSets() - Method in class de.jstacs.sequenceScores.statisticalModels.trainable.variableStructure.parsimonious.dataStructures.SymbolSet
 
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