Analysis of genes having pattern m_fermentation_orfnum2SD_n14 in their upstream region

There is about 115 genes out of 6312 (1.82 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

mrt4
357
15
2.306
0.04406
0.2471
550
22
2.195
0.05088
0.04365

pet127
4
4
54.89
0.1849
4.796e-06
4
4
54.89
0.1849
4.781e-06

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
mrt4	357	15	2.306	0.04406	0.2471	550	22	2.195	0.05088	0.04365
pet127	4	4	54.89	0.1849	4.796e-06	4	4	54.89	0.1849	4.781e-06