Analysis of genes having pattern m_other_transport_facilitators_orfnum2SD_n10 in their upstream region

There is about 263 genes out of 6312 (4.17 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
 Testwise p-value
0.01
2.101e-05
0.05
0.000105

Experiment
 p=0.0250
 p=0.0500

#Signif
 Signif.w. Pattern
 Ratio
 Corr
 p-value
 #Signif
 Signif.w. Pattern
 Ratio
 Corr
 p-value
ymr293c
348
27
1.862
0.04515
0.2329
495
39
1.891
0.05615
0.01463
FKS1 (tet promoter)
146
15
2.466
0.04818
0.1557
224
23
2.464
0.05994
0.009098
KAR2 (tet promoter)
768
56
1.75
0.0605
0.003374
1064
70
1.579
0.05693
0.007998