Analysis of genes having pattern m_regulation_of_nucleotide_metabolism_orfnum2SD_n5 in their upstream region

There is about 160 genes out of 6312 (2.53 percent) having the given pattern in their 300bp upstream region. Gene expression is deemed significantly altered if it has a p-value less than given acording to the gene specific error model of Hughes et Al. (Cell 2000)

The p-value column in the table is adjusted with Holm method to represent tablewise p-value.

The color coding is as follows:

Tablewise p-value
Testwise p-value

0.01
2.101e-05

0.05
0.000105

Experiment
p=0.0250
p=0.0500

#Signif
Signif.w. Pattern
Ratio
Corr
p-value
#Signif
Signif.w. Pattern
Ratio
Corr
p-value

anp1
384
23
2.363
0.05676
0.01318
541
30
2.188
0.05957
0.004721

vac8
121
14
4.564
0.08083
0.0001838
199
21
4.163
0.0926
2.739e-06

Experiment	p=0.0250					p=0.0500
	#Signif	Signif.w. Pattern	Ratio	Corr	p-value	#Signif	Signif.w. Pattern	Ratio	Corr	p-value
anp1	384	23	2.363	0.05676	0.01318	541	30	2.188	0.05957	0.004721
vac8	121	14	4.564	0.08083	0.0001838	199	21	4.163	0.0926	2.739e-06