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University of Helsinki Department of Computer Science
 

Department of Computer Science

Seminar: Computational Systems Biology, Spring 07

Timetable


DATE
PRESENTER
TOPIC (Click topic for seminar report)
OPPONENT
14.2.
Esa Pitkänen
Modeling and identification of biological networks.
Sirkku Karinen
21.2.
Marko Laakso
Reconstructing the metabolic network of a bacterium from its genome. Riku Louhimo
21.2.
Paula Jouhten
Identification of Genome-Scale Metabolic Network Models Using Experimentally Measured Flux Profiles.  Ville Vahervuori
14.3.
Cheng Lu
Completion of Biological Networks with Output Kernel Trees
Marko Laakso
14.3.
Markus Heinonen
Metabolomic database annotations via query of elemental compositions: Mass accuracy is insufficient even at less than 1 ppm. Jyrki Kankaanpää
21.3.
Ville Vahervuori
Network Biology: Understanding  the Cell's Functional Organization Markus Heinonen
21.3. Sari Bombino Evidence for dynamically organized modularity in the yeast protein-protein interaction network.
Hao Wang
28.3.
Sirkku Karinen
Interpretation of genetic interactions
Cheng Lu
28.3.
Janne Ravantti
Network motifs in the transcriptional regulation network of Escherichia coli. Ari Rantanen, Juho Rousu
4.4.
Hao Wang
Metabolic engineering at system level Paula Jouhten
18.4.
Jyrki Kankaanpää
VANTED: A system for advanced data analysis and visualization in
the context of biological networks
.
Esa Pitkänen
25.4.
Riku Louhimo
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models. Sari Bombino